Introduction
to Genomics
-
Features
of genomes
-
coding
DNA
-
non-coding
DNA
-
Teleological
Implications
-
Definitions
of the Gene
-
Genomics
-
Genome
sequencing projects
-
Bioinformatics (data bases
and annotation)
-
Proteomics
-
Structural Biology
-
Phylogenetic Analysis and
Evolution
|
Some Basic Tools for Computational Biology
Search
Techniques for the WWW
-
Bare bones
of computer searches
-
Search
Engines for the Web
Excel
Tutorial
|
NCBI
Genome Database and Genome Maps
-
Sequencing
and Mapping
-
Gene nomeclature
-
Low resolution
mapping
-
recombination
mapping
-
break
point mapping
-
radiation
hybrid mapping
-
High Resolution
mapping
-
STSs and
ETSs
-
BACs and
YACs
-
Sequencing
and Contig Assembly
-
Annotation
-
ENTREZ:
Genomic Biology and Map Viewer
-
Organism
Resources
-
Map Viewer
-
Genome-wide
searches
-
Chromosome-specific
searches
-
Maps available
Map
queries
|
|
Sequence
Alignments
-
Theory
of optimal alignments
-
Application
of Dynamic Programming
-
Matrices
of log-odds scores (substitution matrices)
-
Statistics
and Significance of the Alignment
-
Computer
applications of Smith-Waterson Algorithm
-
LALIGN
-
FASTA
-
PRSS
-
Ndjinn
-
BLAST
-
CLUSTALW
-
Analysis
of myoglobins with Biology Workbench
-
BLAST
Project
Biology Workbench Nucleotide Tools
ORF Finder
Translator
Restriction Sites
PCR primers (Primer
3)
|
Protein Structure databases
and Molecular Modeling
Motifs, Fingerprints and Families
of Proteins PROSITE
-
PFAM
-
FINGERPRINTSCAN
-
SAPS
-
PATTERNMATCH
CHIME Tutorials / Molecular
Modeling with RasMol
-
Introduction to CHIME: DNA
-
Introduction to CHIME: Hemoglobin
-
PIR and PDB
-
RasMol
Other Structure Viewers
-
Protein Explorer
-
CD3
-
VAST
|
Comparative Genomics, Phylogeney
and Evolution
|
Protein
Analysis Project
|